A Preliminary Comparison of Ichthyoplankton Surveys Vs. Environmental DNA Metabarcoding to Survey a Nearshore Marine Fish Community

Released on by Michaela Faith Labare
preview-18

  • A Preliminary Comparison of Ichthyoplankton Surveys Vs. Environmental DNA Metabarcoding to Survey a Nearshore Marine Fish Community Book Detail

  • Author : Michaela Faith Labare
  • Release Date : 2022
  • Publisher :
  • Genre :
  • Pages : 0
  • ISBN 13 :
  • File Size : 81,81 MB
DOWNLOAD BOOK

A Preliminary Comparison of Ichthyoplankton Surveys Vs. Environmental DNA Metabarcoding to Survey a Nearshore Marine Fish Community by Michaela Faith Labare PDF Summary

Book Description: Understanding fish diversity patterns is critical for fisheries management amidst overfishing and climate change. Fish egg surveys have been used to characterize pelagic spawning fish communities, estimate biomass, and track population trends in response to perturbations. Environmental DNA (eDNA) metabarcoding has been implemented to rapidly and non-invasively survey marine ecosystems. To understand the efficacy of eDNA metabarcoding for assessing pelagic spawning fish community composition, concurrent eDNA metabarcoding and fish egg DNA barcoding off Scripps Institution of Oceanography's Pier (La Jolla, CA) were conducted. Both methods revealed seasonal patterns in agreement with previous fish and fish egg surveys. Species richness was highest in late spring and summer. The presence and spawning of commercially important species and species of conservation concern were detected. Both methods showed overlap for pelagic spawning fishes for broadcast spawners, schooling fish, and locally abundant species. Some actively spawning species were not co-detected with eDNA, likely due to different sampling strategies, taxonomic biases, and abiotic/biotic factors influencing eDNA transport, shedding, and degradation. We identified key advantages and disadvantages of each method. Fish egg barcoding provided information on spawning trends but did not detect taxa with alternate reproduction strategies. Metabarcoding eDNA detected species not found in fish egg sampling, including demersal and viviparous bony fishes, non-spawning adults, Chondrichthyan, and Mammalian species, but missed abundant pelagic fish eggs. This study demonstrates that DNA barcoding of fish eggs and eDNA metabarcoding work best in tandem as each method identified unique fish taxa and provided complementary ecological and biological insight.

Disclaimer: www.yourbookbest.com does not own A Preliminary Comparison of Ichthyoplankton Surveys Vs. Environmental DNA Metabarcoding to Survey a Nearshore Marine Fish Community books pdf, neither created or scanned. We just provide the link that is already available on the internet, public domain and in Google Drive. If any way it violates the law or has any issues, then kindly mail us via contact us page to request the removal of the link.

Validation of EDNA Metabarcoding

Validation of EDNA Metabarcoding

File Size : 99,99 MB
Total View : 4877 Views
DOWNLOAD

"Environmental DNA (eDNA) sampling provides a method for assessing fish communities that has potential as a supplement to traditional sampling methods due to it

DNA metabarcoding

DNA metabarcoding

File Size : 67,67 MB
Total View : 9668 Views
DOWNLOAD

We present guidelines for using environmental DNA metabarcoding, together with conventional techniques, to monitor the taxonomic diversity of phytoplankton in m

The Ecology of Marine Fishes

The Ecology of Marine Fishes

File Size : 41,41 MB
Total View : 389 Views
DOWNLOAD

Marine fishes have been intensively studied, and some of the fundamental ideas in the science of marine ecology have emerged from the body of knowledge derived